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1.

Synthesis, characterization and computational investigation of 5-chloro-2-(5-(2-methyl-1H-benzimidazol-5-yl)-1,3,4-oxadiazol-2-yl)aniline: DFT, parr indices, ADMET, molecular docking and molecular dynamics Pages 101-116 Right click to download the paper Download PDF

Authors: Assiya Atif, Bendaoud Ahmed, Houssine Ait Sir, Salah Mohammed, Zeroual Abdellah

DOI: 10.5267/j.ccl.2025.10.006

Keywords:

Abstract:
This study presents the synthesis and characterization of the compound 5-chloro-2-(5-(2-methyl-1H-benzimidazol-5-yl)-1.3.4-oxadiazol-2-yl)aniline, by 1H NMR, 13C NMR, FTIR-ATR infrared spectroscopy and mass spectrometry. The theoretical investigation was evaluated using density functional theory (DFT), electrostatic surface potential (ESP) analysis as well as Fukui indices, ADME/Tox properties, molecular docking and Molecular Dynamics studies of this molecule.
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Journal: CCL | Year: 2026 | Volume: 15 | Issue: 1 | Views: 107 | Reviews: 0

 
2.

Synthesis, Characterization, and Computational Investigation of 2,5-Bis(2-Methyl-1H-benzimidazol-5-yl)-1,3,4-oxadiazole: Quantum Chemical Analysis, ADME Prediction, Molecular Docking, and MD-Based Corrosion Study for Photonic and Therapeutic Applications Pages 133-146 Right click to download the paper Download PDF

Authors: Assiya Atif, Soukaina Ameur, Houssine Ait Sir

DOI: 10.5267/j.ccl.2025.10.004

Keywords:

Abstract:
This study presents the synthesis and characterization of 2,5-bis(2-methyl-1H-benzimidazol-5-yl)-1,3,4-oxadiazole, using 1H NMR, 13C NMR, mass spectrometry and FTIR-ATR infrared spectroscopy. Quantum chemical analysis revealed that P1 possesses a balanced electrophilic–nucleophilic profile, enabling interactions with diverse biological targets. Its HOMO–LUMO gap and electronic stability suggest potential applications in photonic devices. ADMET predictions indicated favorable pharmacokinetics and overall drug-likeness. Molecular docking demonstrated high binding affinities toward anticancer, antibacterial, and antifungal proteins, with P1 reproducing reference ligand binding modes while forming additional stabilizing contacts. Molecular Dynamics simulations captured the thermal motion and conformational flexibility of P1 on the Fe(110) surface, while Monte Carlo simulations identified energy-minimized, compact adsorption conformations. Both approaches confirmed thermodynamically favorable chemisorption, stabilized by direct surface interactions and solvent/ionic contributions. Together, these findings highlight P1 as a dual-purpose scaffold, combining selective biological activity, favorable electronic properties, and strong surface interactions. This integrated computational study supports its potential for both therapeutic development and optoelectronic application.
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Journal: CCL | Year: 2026 | Volume: 15 | Issue: 1 | Views: 90 | Reviews: 0

 
3.

Design, synthesis, and antidiabetic evaluation of novel 1,3-di(1,3,4-oxadiazol-2-yl)benzene derivatives as potent pancreatic α-amylase inhibitors: In vitro and in silico approaches Pages 175-192 Right click to download the paper Download PDF

Authors: Assiya Atif, Mohamed Marghich, Nor Nabil, Abouelhaoul El Alami, Nour Elhouda Daoudi, Tarik Harit, Fatima Youssoufi, Mohammed Salah, Abdelali Bitar, Houssine Ait Sir

DOI: 10.5267/j.ccl.2025.9.003

Keywords: Synthesis Molecular docking Molecular dynamics Diabetes α-amylase

Abstract:
The synthesis of a new family of 1,3-di(1,3,4-oxadiazol-2-yl)benzene derivatives is reported. Their structures were characterized using standard spectroscopic techniques such FT-IR, ¹H-NMR, ¹³C-NMR spectroscopies and mass spectrometry. The antidiabetic potential of these synthetic molecules was evaluated by determining their in vitro inhibitory activity against pancreaticα-amylase enzymes. In addition, in silico molecular docking and pharmacokinetic simulations were performed to examine the compounds binding interactions with the enzyme active site and to assess their ADMET properties. Compared the used positive control, the obtained results show that all 1,3-di(1,3,4-oxadiazol-2-yl)benzene derivatives demonstrated a good potency to inhibit the α-amylase enzyme, Especially, the 2,2'-(1,3-phenylebis(1,3,4-oxadiazole-5,2-diyl))dianiline (5d) with IC50 of 0.393 mg/mL. Furthermore, the experimental findings were supported by molecular dynamics, docking and ADMET studies. The obtained data emphasizes compound 5d as potential as safe and effective therapeutic agents targeting the pancreatic α-amylase enzyme.
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Journal: CCL | Year: 2026 | Volume: 15 | Issue: 1 | Views: 85 | Reviews: 0

 
4.

Comprehensive evaluation of a benzimidazole-1,3,4-oxadiazole derivative for corrosion protection of C38 steel in HCl: Experimental, molecular dynamics, monte carlo, and in silico pharmacokinetic approaches Pages 777-792 Right click to download the paper Download PDF

Authors: Assiya Atif, Soukaina Ameur, Ahmed Bendaoud, Rachid Hsissou, Said Jebbari, Houssine Ait Sir, Mohammed Salah

DOI: 10.5267/j.ccl.2025.8.005

Keywords:

Abstract:
In this study, 2-methyl-5-(2-methyl-1H-benzimidazol-5-yl)-1,3,4-oxadiazole, a novel heterocyclic compound derived from 1,3,4-oxadiazole, is synthesised and thoroughly characterised. Mass spectrometry, FTIR-ATR spectroscopy, ¹H-NMR, and ¹³C-NMR were used for structural elucidation. This compound's ability to inhibit corrosion in C38 steel in 1 M hydrochloric acid was examined using both stationary (potentiodynamic polarisation) and non-stationary (electrochemical impedance spectroscopy, EIS) electrochemical techniques. The inhibitor considerably decreased the corrosion current density, as shown by the Tafel polarisation curves, and its effectiveness improved with increasing concentration. Nyquist plots supported these results by showing that charge transfer resistance increased with immersion time, indicating stable surface adsorption and efficient protection. Monte Carlo (MC) and Molecular Dynamics (MD) simulations were performed on the Fe(110) surface in the presence of a simulated acidic aqueous environment in order to obtain molecular-level understanding of the inhibitor's adsorption behaviour. These simulations supported the high inhibition efficiency observed in experiments by confirming strong adsorption energies and stable conformations of the inhibitor on the metallic surface. Moreover, molecular docking studies revealed the compound's multi-target binding affinities, which frequently outperformed reference ligands and indicated the possibility of wider biological applications. Although hepatotoxicity was noted as a possible concern that required additional biological validation, in silico ADME and toxicity profiling showed generally positive pharmacokinetic properties. This multidisciplinary strategy, which combines computational modelling, pharmacological profiling, and experimental electrochemistry, highlights the potential of this benzimidazole–oxadiazole derivative as a dual-purpose corrosion inhibitor and bioactive candidate.
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Journal: CCL | Year: 2025 | Volume: 14 | Issue: 4 | Views: 133 | Reviews: 0

 
5.

Synthesis, characterization and in silico evaluation of 2,5-bis(2-(trifluoromethyl)-1H-benzimidazol-5-yl)-1,3,4-oxadiazole: Reactivity, ADME/toxicity, and docking against therapeutic targets Pages 793-804 Right click to download the paper Download PDF

Authors: Assiya Atif, Soukaina Ameur, Houssine Ait Sir

DOI: 10.5267/j.ccl.2025.8.004

Keywords: Synthesis, Characterization, 1, 3, 4-oxadiazole, Reactivity, Docking

Abstract:
This study presents the synthesis and characterization of a novel 1,3,4-oxadiazole derivative compound, 2,5-bis(2-(trifluoromethyl)-1H-benzimidazol-5-yl)-1,3,4-oxadiazole, using 1H NMR, 13C NMR, mass spectrometry and FTIR-ATR infrared spectroscopy. Reactivity, ADME/toxicity and docking to therapeutic targets were investigated revealed that 2,5-bis(2-(trifluoromethyl)-1H-benzimidazol-5-yl)-1,3,4-oxadiazole (BTBO) exhibits excellent intestinal absorption, limited solubility and CNS penetration, and restained clearance. It interacts with key cytochromes and transporters, suggesting possible drug–drug interactions. Toxicity evaluations indicated mutagenic potential and moderate oral toxicity, with no hepatotoxicity or skin sensitization. Molecular docking demonstrated strong binding affinities to targets in six therapeutic areas, often outshining reference ligands, supporting its auspicious pharmacokinetic and therapeutic potential.
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Journal: CCL | Year: 2025 | Volume: 14 | Issue: 4 | Views: 182 | Reviews: 0

 
6.

A new route to synthesis 3-trifluoromethyl substituted pyrrole and 4-trifluoromethyl substituted 2-(1H)-Pyridinone Pages 623-632 Right click to download the paper Download PDF

Authors: Fatima Youssoufi, Abouelhaoul El Alami, Assiya Atif, Mustapha Soufyane

DOI: 10.5267/j.ccl.2025.2.004

Keywords: DAMFA, Enaminedione, Trifluoromethyl pyrrole, Trifluoromethyl-1H-pyridine-2-one

Abstract:
In the present work, an enaminedione 2 was easily obtained in excellent yield (92 %) by the N-N exchange reaction of DAMFA (diethylaminomethylenehexafluoroacetylacetone) 1 with ethyl glycinate hydrochloride using the Michael 1,4-addition/elimination approach. The obtained compound 2 was used as a precursor in the development of a new synthesis of 3-trifluoromethyl pyrrole 3 and 4-trifluoromethyl-(1H)-2-pyridinone 4. A mechanism involving nucleophilic substitution and intramolecular cyclization is proposed. The obtained compounds were identified and confirmed by Fourier transform infrared spectroscopy, proton and carbon nuclear magnetic resonance spectroscopy, and high-resolution mass spectrometry. The results of the analyses are in good agreement with the proposed structures of the synthesized compounds.
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Journal: CCL | Year: 2025 | Volume: 14 | Issue: 3 | Views: 277 | Reviews: 0

 
7.

New phosphonylation route of a series of 2-AlkylBenzimidazole derivatives: Synthesis, characterization, biological evaluation, ADMET prediction, molecular docking and DFT studies Pages 643-658 Right click to download the paper Download PDF

Authors: Fatima Youssoufi, Manal Zefzoufi, Soukaina Elorchi, Abouelhaoul El Alami, Assiya Atif, Abdoul-Hakim Mohamed, Mohammed Salah, Rabiaa Fdil, Mustapha Soufyane, Hamid Sdassi

DOI: 10.5267/j.ccl.2025.2.002

Keywords: Benzimidazole, Phosphonylation, Antimicrobial activity, ADMET, Molecular docking, DFT analysis

Abstract:
A series of new benzimidazole phosphonate derivatives was obtained via nucleophilic addition of triethyl phosphite to the imine of the imidazole subgroup under solvent-free conditions. Structures of the formed products were confirmed using spectroscopic data (ATR-FTIR, 1H-NMR, 13C-NMR, and MS). The antimicrobial profiles of the synthesized compounds were examined, and promising activities against Staphylococcus aureus, Escherichia coli, Pseudomonas aeruginosa, and Candida albicans were revealed, showing significant inhibition zone diameters ranging from 13 to 17 mm. Alongside these experimental findings, in silico investigations were conducted using ADMET characteristics, which showed a positive pharmacokinetic profile and provided valuable information on potential interactions with target molecules. Besides, docking studies against tested microorganisms revealed further insights on the compounds’ binding interactions with the active sites. Finally, DFT analysis was performed to shed light on the synthesis of novel molecules.
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Journal: CCL | Year: 2025 | Volume: 14 | Issue: 3 | Views: 280 | Reviews: 0

 
8.

Review of synthesis process of 1,3,4-oxadiazole analogs Pages 339-364 Right click to download the paper Download PDF

Authors: Assiya Atif, Abouelhaoul El Alami, Fatima Youssoufi, Said Jebbari, Houssine Ait Si

DOI: 10.5267/j.ccl.2024.11.002

Keywords: Synthesis

Abstract:
This review presents 1,3,4-oxadiazole which has considerable importance in the fields of pharmacy, medicine, corrosion and coordinate chemistry. 1,3,4-oxadiazole plays a vital role and is a simple substance for many pharmacokinetic compounds such as antifungal drugs, antibacterial drugs, most cancer tumors and anti-inflammatory drugs. This study describes many methods for the synthesis of 1,3,4-oxadiazole.
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Journal: CCL | Year: 2025 | Volume: 14 | Issue: 2 | Views: 1200 | Reviews: 0

 

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